Adsorption and formation energies of nucleobase–Fullerene: A first-principles simulation

Sari, Nur Anggita and Apriati, Yosephine Novita and Nugraheni, Ari Dwi and Sholihun, Sholihun (2024) Adsorption and formation energies of nucleobase–Fullerene: A first-principles simulation. International Journal of Modern Physics B: 2550050. ISSN 02179792

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Abstract

A computational study was conducted using the density functional theory (DFT) method to determine the energy stability of a system composed of deoxyribonucleic acid/ribonucleic acid (DNA/RNA) nucleobase molecules on Fullerene C60 as a potential gene delivery system. The feasibility of the system for gene delivery and nanomedicine applications was assessed by examining the strong geometric bonds formed between Adenine, Cytosine, Guanine, Thymine, and Uracil nucleobases and C59Si molecules in close proximity to Fullerene. The bonding affinities of each nucleobase with Fullerene were observed to follow the order Uracil > Guanine > Cytosine > Thymine > Adenine. Furthermore, calculations of adsorption and formation energies were performed to determine the most stable configuration within the Fullerene structure. Guanine demonstrated the highest stability, indicating its potential as an efficient carrier for the delivery of guanine-based genetic material into cells. Additionally, the Fullerene surface exhibited a high propensity for Cytosine adherence, as evidenced by the lowest adsorption energy observed for the interaction between Cytosine and Fullerene. The potential application of Si-doped Fullerene C60 as a gene delivery system was highlighted, based on the strong interactions observed with DNA/RNA nucleobase molecules. These valuable insights will contribute to the development of efficient gene delivery strategies and offer promising prospects for advancing gene therapy and nanomedicine.

Item Type: Article
Uncontrolled Keywords: Computational study; gene delivery system; nucleobases; Si-doped fullerene C60
Subjects: Q Science > QC Physics
Divisions: Faculty of Mathematics and Natural Sciences > Physics Department
Depositing User: Masrumi Fathurrohmah
Date Deposited: 26 Feb 2025 08:29
Last Modified: 26 Feb 2025 08:29
URI: https://ir.lib.ugm.ac.id/id/eprint/14881

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