Setiawati, Yuli and Nopitasari, Sri and Lawrie, Muhammad Dylan and Purwantoro, Aziz and Widada, Jaka O.K.O. and Sasongko, Aries Bagus and Ninomiya, Kana and Asano, Yuuki and Matsumoto, Shogo and Yoshioka, Yasushi and Semiarti, Endang (2020) Agrobacterium-mediated Transformation Facillitates the CRISPR/Cas9 Genome Editing System in Dendrobium macrophyllum A. Rich orchid. In: THE 6TH INTERNATIONAL CONFERENCE ON BIOLOGICAL SCIENCE ICBS 2019: “Biodiversity as a Cornerstone for Embracing Future Humanity”, 10–11 October 2019, Yogyakarta, Indonesia.
Full text not available from this repository. (Request a copy)Abstract
As an ornamental plant, orchid has high economic value for its appearance. Some methods can be used to improve the orchid performance, for instance creating variegated plants that have green- and white-sectored leaves by mutating the VARIEGATED 2 (VAR2) gene using CRISPR/Cas9 Genome editing system. The objective of this study was to determine whether CRISPR/Cas9 could be introduced to the Dendrobium macrophyllum orchid protocorm by using Agrobacterium tumefaciens-mediated transformation method. Genetic transformation using A.tumefaciens is one of the inexpensive and reproducible molecular breeding approaches. The construct of T-DNA Ubi:: Cas9:: U3:: VAR2/ pRGEB32 in the A. tumefaciens strain EHA 105 was infected into 8-weeks old orchid protocorms, then the protocorms were maintained in Vacin and Went culture medium with addition of 6 mg/L-1 Hygromycin for antibiotic selection of transformants for 4 weeks. The results showed that the highest transformation efficiency (0.66) was obtained in the 15-minute infection period although 0.43 in 30 minutes and 0.23 in 45 minutes. This result was confirmed by PCR analysis that several genes were amplified in the genome of D. macrophyllum such as, Cas9 (402 bp), HPT (545 bp), VAR2 (723 bp) and trnL-F (1200 bp) as internal control. Sequence analysis showed that there was a mutation in the form of substitution at the target site. © 2020 Elsevier B.V., All rights reserved.
| Item Type: | Conference or Workshop Item (Paper) |
|---|---|
| Additional Information: | Cited by: 8 |
| Uncontrolled Keywords: | Diseases and conditions, Genomics, Antibiotics, Sequence analysis, Cell cultures |
| Subjects: | Biology |
| Divisions: | Faculty of Biology > Doctoral Program in Biology |
| Depositing User: | Sri JUNANDI |
| Date Deposited: | 24 Oct 2025 00:56 |
| Last Modified: | 24 Oct 2025 00:56 |
| URI: | https://ir.lib.ugm.ac.id/id/eprint/22967 |
