Anggraini, Nina Bunga and Sholihah, Annisa and Khasna, Elhah Nailul and Retnaningtyas, Riri Wiyanti and Suharti, Suharti and Listyorini, Dwi (2020) Genetic relationship between local rice varieties based on matK and rbcL genes. In: THE 6TH INTERNATIONAL CONFERENCE ON BIOLOGICAL SCIENCE ICBS 2019: “Biodiversity as a Cornerstone for Embracing Future Humanity”, 10–11 October 2019, Yogyakarta, Indonesia.
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Indonesia home of abundant indigenous and hybrid rice varieties. The phenomenon of phenotipic-plasticity allows varieties or even the same species to exhibit different phenotypic characteristics when planted in different locations. Thus, the identification based on phenotypic characters is needed to be supported by genetic data. The aim of this research was to unveil the relationship between local rice varieties provided from East Java, Banten, and Samarinda based on matK and rbcL genes. Total DNA from leaves were used as template for amplification of both genes. Phylogenetic trees were reconstructed using Neighbour-Joining (NJ) models in Kimura-2 parameters with 1000 bootstraps. The phylogenetic analysis using matK proved that rice varieties from East Java were closely related to rice varieties from Banten rather than to rice varieties from Samarinda. Meanwhile the same study using the rbcL gave inconsistent results © 2020 Elsevier B.V., All rights reserved.
| Item Type: | Conference or Workshop Item (Paper) |
|---|---|
| Additional Information: | Cited by: 2 |
| Uncontrolled Keywords: | Java, Phylogenetics |
| Subjects: | Biology |
| Divisions: | Faculty of Biology > Doctoral Program in Biology |
| Depositing User: | Sri JUNANDI |
| Date Deposited: | 04 Nov 2025 03:38 |
| Last Modified: | 04 Nov 2025 03:38 |
| URI: | https://ir.lib.ugm.ac.id/id/eprint/23794 |
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