Data mining analysis of mir-638 and key genes interaction in cisplatin resistant triple-negative breast cancer

Hermawan, Adam and Putri, Herwandhani (2019) Data mining analysis of mir-638 and key genes interaction in cisplatin resistant triple-negative breast cancer. Indonesian Journal of Biotechnology, 24 (2). 65 - 73. ISSN 08538654

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Abstract

Cisplatin is one of the chemotherapy for the treatment of triple-negative breast cancer (TNBC), but its effectiveness is limited because of the phenomenon of chemoresistance. miR-638 was shown to regulate chemoresistance; however, it has never been validated in the cisplatin-resistant tumor from patients. This present study aimed to identify the key gene regulatory networks of miR-638 and evaluate the potential role of the miR-638 and its targets as potential prognosis biomarkers for cisplatin-resistance triple-negative breast cancer patients. The miR-638 target was obtained from the miRecords database while the mRNA of chemoresistance biomarker candidate was obtained from the GSE18864 of GEO database, which is mRNA of cisplatin-resistance TNBC patients. CCND1 and FZD7 are potential candidates for cisplatin chemoresistance biomarkers in patients with TNBC. Moreover, a Kaplan-Meier survival plot showed that breast cancer patients with low mRNA levels of FZD7 had significantly worse overall survival than those in higher mRNA expression group. Taken together, miR-638 plays a role in cisplatin resistance mechanism through a mechanism involving its target gene CCND1 and FZD7. Overall, miR-638, CCND1, and FZD7 are candidates for cisplatin biomarker resistance in TNBC.

Item Type: Article
Additional Information: Cited by: 2; All Open Access; Gold Open Access; Green Open Access
Uncontrolled Keywords: Chemoresistance; Data mining; MiR-638; Triple-negative breast cancer
Subjects: R Medicine > RS Pharmacy and materia medica
Divisions: Faculty of Pharmacy
Depositing User: Sri JUNANDI
Date Deposited: 09 Jun 2026 05:52
Last Modified: 09 Jun 2026 05:52
URI: https://ir.lib.ugm.ac.id/id/eprint/26532

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