Raharjo, Tri Joko and Utami, Woro Murti and Fajr, Atdrian and Haryadi, Winarto and Swasono, Respati Tri (2021) Antibacterial peptides from tryptic hydrolysate of Ricinus communis seed protein fractionated using cation exchange chromatography. Indonesian Journal of Pharmacy, 32 (1). 74 – 85. ISSN 23389427
1260-Article Text-6007-2-10-20210318.pdf
Restricted to Registered users only
Download (1MB) | Request a copy
Abstract
Antimicrobial peptide (AMP) has become an interesting target in developing new antibiotics. AMP is possibly generated through the digestion of protein. The protein of castor (Ricinus communis) seed is characterized as a ribosome-inactivating protein (RIP) that can be a source of AMP. The objective of this research was to identify antibacterial peptides from Ricinus communis seed protein hydrolysate. The seed protein was isolated using sodium dodecyl sulfate and subsequently digested using trypsin. The hydrolysate was fractionated using a strong cation exchange chromatography system, and the resulting fractions were tested for antibacterial activity. The peptides present in the active fraction were identified using high-resolution mass spectrometry. The results showed that the pH 4 and pH 5 fractions of the elution buffer exhibited antibacterial activity, with the pH 4 fraction of the hydrolysate having high activity against both gram-negative (Escherichia coli) and gram-positive (Staphylococcus aureus) bacteria. Three peptides that have the sequences EESETVGQR, GQSTGTGQQER, and LDALEPDNR could be responsible for the activity of the pH 4 fraction. The antibacterial activity of these peptides, which is due to their ionic properties and secondary structure, supports the disruption of the bacterial cell membrane. It can be concluded that Ricinus communis seed protein hydrolysate contains peptides with sequence EESETVGQR, GQSTGTGQQER, and LDALEPDNR that are potent to be used as AMP lead compounds.
Item Type: | Article |
---|---|
Additional Information: | Library Dosen |
Uncontrolled Keywords: | peptides, antimicrobial, R Communis, SDS extract, protein, HRMS |
Subjects: | Q Science > QA Mathematics Q Science > QD Chemistry |
Divisions: | Faculty of Mathematics and Natural Sciences > Chemistry Department |
Depositing User: | Sri JUNANDI |
Date Deposited: | 17 Sep 2024 02:52 |
Last Modified: | 17 Sep 2024 02:52 |
URI: | https://ir.lib.ugm.ac.id/id/eprint/4910 |