Aphelenchoides varicaudatus (Nematoda: Aphelenchoididae) and Helicotylenchus erythrinae (Nematoda: Hoplolaimidae) from Garlic Plantation in Magelang, Central Java, Indonesia

Maharani, R. and Indarti, S. and Soffan, A. and Hartono, S. (2023) Aphelenchoides varicaudatus (Nematoda: Aphelenchoididae) and Helicotylenchus erythrinae (Nematoda: Hoplolaimidae) from Garlic Plantation in Magelang, Central Java, Indonesia. Helminthologia (Poland), 60 (1). pp. 94-105. ISSN 04406605

[thumbnail of Nematoda-Aphelenchoididae-and-Nematoda-Hoplolaimidae-from-Garlic-Plantation-in-Magelang-Central-Java-Indonesia.pdf] Text
Nematoda-Aphelenchoididae-and-Nematoda-Hoplolaimidae-from-Garlic-Plantation-in-Magelang-Central-Java-Indonesia.pdf
Restricted to Registered users only

Download (33MB) | Request a copy

Abstract

There were two most found genera of plant parasitic nematodes from garlic plantation in Magelang, Central Java, Indonesia which suffered losses due to bulb rot, Aphelenchoides and Helicotylenchus. Polymerase Chain Reaction (PCR) was conducted using a pair of universal nematode primer (D2A/D3B) to determine the Aphelenchoides and Helicotylenchus species from those host. Both genera were amplified at ~780 bp. The Blast-N results for the Aphelenchoides showed high identity to Aphelenchoides varicaudatus from Yunnan China (HQ283353) with 99.47 identity, while the Helicotylenchus showed 95.22 identity to Helicotylenchus erythrinae from Colombia (MT321739). From morphological and molecular data, we confirm that the Aphelenchoides species is A. varicaudatus. Based on female morphological character, Helicotylenchus species refers to H. erythrinae. Which is also supported by its nucleotide alignment which has same region character as H. erythrinae (MT321739). This is the first report of molecular characterization of H. erythrinae in Indonesia.

Item Type: Article
Additional Information: Library Dosen
Uncontrolled Keywords: Aphelenchoides varicaudatus; Helicotylenchus erythrinae; identifi cation; molecular; morphological
Subjects: S Agriculture > S Agriculture (General)
Depositing User: Laili Hidayah Hidayah
Date Deposited: 23 Aug 2024 07:43
Last Modified: 23 Aug 2024 07:43
URI: https://ir.lib.ugm.ac.id/id/eprint/3096

Actions (login required)

View Item
View Item